23
883
0
4396
42
Please note that trimesters are pooled at the moment and that the results are likely to change when the trimesters are assessed separately.
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[1] "Jonsson et al. (2005)" "Jonsson et al. (2005)"
[1] "Molvarec et al. (2011)" "Molvarec et al. (2011)"
[1] "Tosun et al. (2010)" "Tosun et al. (2010)"
[1] "Taylor et al. (2016)" "Taylor et al. (2016)"
[1] "Taylor et al. (2016)" "Taylor et al. (2016)"
[1] "Tangerås et al. (2015)" "Tangerås et al. (2015)"
[1] "Ozler et al. (2012)" "Ozler et al. (2012)" "Ozler et al. (2012)"
[4] "Ozler et al. (2012)"
[1] "Mihu et al. (2015)" "Mihu et al. (2015)"
[1] "Ma et al. (2019)" "Ma et al. (2019)"
[1] "Guven et al. (2009)" "Guven et al. (2009)" "Guven et al. (2009)"
[1] "Aggarwal et al. (2019)" "Aggarwal et al. (2019)"
[1] "Aggarwal et al. (2019)" "Aggarwal et al. (2019)"
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Feel free to contribute! The easiest way to contribute is through github and is described step-wise below.
If you are new to git, this guide can help you getting started. The repository for the database is https://github.com/andjar/CyPreg.git
Check data/studies.csv
(or the Overview page) to see that the study you want to add is missing from the database
Add the new study to data/studies.csv
. Here, type
should be either raw
or aggregated
, and the preferred filename is of the form firstauthorYYYY.csv
(e.g. stokkeland2019.csv
)
The data are to be added in a new .csv-file but it may be nice to use an existing file as template. Raw data live in the data/raw
folder and aggregated data in data/aggregated
.
The data file should have a long format where each cytokine measurement has its own row. The variable names are columns with the variable name on top. Please see data/variables.csv
for variable names
If you want to append a new variable, you must also add it to data/variables.csv
and provide a short description so that others can understand exactly what it means
Please adhere to the following convention: Variable names should have the form basename.suffix
where basename
is added to data/variable.csv
. Available suffixes, that are used in the csf files that contain data, are
median
: If the given value is reported as median
mean
: If the given value is reported as mean
sd
: If the variation in the given value is reported as standard deviation
percentile.%n
: If the variation in the given value is reported as the %nth percentile. Remember that range corresponds to the 0-100th percentile
def
: To provide details regarding a basevariable
The highest and lower percentiles will be used for basename.upper
and basename.lower
, respectively. If standard deviation is given, upper and lower will be the corresponding value +/- 1.97 times the standard deviation
Cytokine names should match the column cytokine
in data/cytokines.csv